Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., two-component system DNA-binding response activator KdpE from Pseudomonas putida KT2440

 Score =  135 bits (340), Expect = 6e-37
 Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 4   TLLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD--VKQHWDKADLVILDRQLPDGDSVQ 61
           TLL+++D+  +   L +SL   GY  L A T A+   +    K DLV+LD  LPD D  Q
Sbjct: 6   TLLVIDDEPQIRKFLRISLASQGYKVLEAATGAEGLAQAALGKPDLVVLDLGLPDMDGQQ 65

Query: 62  HLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRS-PDS 120
            L + ++   +PV++L+   +   KV  LD GANDY+TKPF   E  AR+RA LR  P +
Sbjct: 66  VLRELREWSAVPVMVLSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQA 125

Query: 121 GQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWG 180
           G  +       LT+D A R V  +G  + LTR E+ LL  LA + GRV T+ +LL  +WG
Sbjct: 126 GGSEVAASFGPLTVDFAFRRVTLDGVEVALTRKEYALLAILAGHPGRVITQQQLLKDIWG 185

Query: 181 YNHFPTTRTVDTHVLQLRQKL-----PGLEIETLRGVGYKMKA 218
             H   T  +   V  LRQKL         I T  GVGY++ A
Sbjct: 186 PTHAEDTHYLRIVVGHLRQKLGDDPTAPRFIITEAGVGYRLVA 228