Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  132 bits (332), Expect = 5e-36
 Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 17/226 (7%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD-----VKQHWDKADLVILDRQLPDGDS 59
           +LL+EDD   A  +   L +AG+   HA T  D       + WD    +I+DR LP  D 
Sbjct: 3   ILLIEDDSEAAAYMAKGLREAGHVVDHAATGTDGLFLATSERWDA---MIIDRMLPGLDG 59

Query: 60  VQHLMDWKKIKDI-PVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSP 118
           +  +   +   +  PV++L+AL  V D+V GL AG +DYL KP+A AEL ARI A  R  
Sbjct: 60  LAIIQALRAAGNTTPVLVLSALGKVDDRVRGLKAGGDDYLVKPYAFAELLARIEALSRRV 119

Query: 119 DSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHV 178
            S Q ++++   +L +D   R V   G+ I L   EF LL +L  + G+V TR  LL++V
Sbjct: 120 SSTQPETRLKVEDLEMDLLARTVTRGGQEIDLQPREFRLLEYLMRHGGQVVTRTMLLENV 179

Query: 179 WGYNHFPTTRTVDTHVLQLRQK------LPGLEIETLRGVGYKMKA 218
           W Y+  P T  +D H+ +LRQK      LP   I T+RG GY ++A
Sbjct: 180 WEYHFDPQTNLIDVHISRLRQKVDKDFELP--LIHTVRGAGYTLRA 223