Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., two-component system response regulator PmrA from Dickeya dianthicola ME23

 Score =  135 bits (341), Expect = 5e-37
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 4/213 (1%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIADVKQHWDKA--DLVILDRQLPDGDSVQH 62
           LL+VEDD  L +GLL+++   GY C  A T  +       A   LV+LD  LPD D +  
Sbjct: 3   LLIVEDDTLLQEGLLLAMRNEGYVCDCAATAKEADALITSAHYSLVVLDLGLPDEDGLTL 62

Query: 63  LMDWKKIK-DIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSG 121
           L  W++     PV++LTA  TV D+VTGLD GA+DY+ KPFA +E  AR+RA +R    G
Sbjct: 63  LNRWRRNHYQQPVLILTARDTVDDRVTGLDVGADDYMIKPFALSEFQARVRALIRR-HQG 121

Query: 122 QDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGY 181
             DS +   N+T+D   ++V  + + I LT  EF +L  L    G    R+ L   ++ +
Sbjct: 122 SSDSWIRVDNITLDLNNQQVMLDDKPIVLTPKEFAILSRLILKAGSQVHREVLHQDLYSW 181

Query: 182 NHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGY 214
           +  P++ +++ H+  LRQK+    I+TLRG GY
Sbjct: 182 DDDPSSNSLEVHIHNLRQKIGKNRIKTLRGFGY 214