Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  137 bits (344), Expect = 2e-37
 Identities = 79/220 (35%), Positives = 130/220 (59%), Gaps = 6/220 (2%)

Query: 2   KQTLLLVEDDKNLADGLLVSLEQAGYDCLHAETIADVKQHWDK--ADLVILDRQLPDGDS 59
           K  +L+V+D+ ++ + L  +LE+ GY+   A       Q   K   D+++LD  +P+ D 
Sbjct: 6   KIKVLVVDDEPDIIEILTYNLEKEGYEVASASDGVKAVQTAGKFKPDVILLDIMMPNQDG 65

Query: 60  VQ---HLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLR 116
           V+    + D +++K+  +I LTA      +V   D GA+DY+TKP     L +RI A  R
Sbjct: 66  VETCRQIRDMEELKNTFIIFLTARSEEYSEVAAFDVGADDYITKPIKPRALVSRIAALFR 125

Query: 117 SPDSGQDD-SKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELL 175
                + + S++   +LTID+++  +  +G++ITL + EF+LL FLA N   VF+RDELL
Sbjct: 126 RESKKEQEVSQIKIKDLTIDRSSFTIDQDGKTITLPKKEFELLYFLAKNPNMVFSRDELL 185

Query: 176 DHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYK 215
            ++WG + F   RTVD H+ ++R+K+    I T++GVGYK
Sbjct: 186 QNIWGADVFVLARTVDVHIRKVREKIGENYITTVKGVGYK 225