Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  128 bits (321), Expect = 1e-34
 Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 12/222 (5%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIADV----KQHWDKADLVILDRQLPDGDSV 60
           LLL+ED+K +AD L  +L + G    H   + D     +QH    D ++LDR+LPDG+ +
Sbjct: 3   LLLIEDEKEMADALSATLGKQGIVIDHTMRLGDAMELTRQHL--YDAILLDRRLPDGEGL 60

Query: 61  QHLMDWKKIK-DIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPD 119
             +   ++   D P+ILLTA+   +D++ GLD GA+DYL KPF   EL AR+RA LR P 
Sbjct: 61  AFIPKLRRAGVDTPIILLTAMNEPEDRIAGLDGGADDYLGKPFLVGELLARVRAVLRRP- 119

Query: 120 SGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVW 179
           SG   +++    + ID     V  N     L R E  +L+ LA   G+   R  L   V+
Sbjct: 120 SGLAPAEIAAGRIVIDPLHLSVTINSLPFDLPRRELLVLVALAKRKGKSVLRSTLEAAVY 179

Query: 180 GYNHFPTTRTVDTHVLQLRQKL----PGLEIETLRGVGYKMK 217
            Y     +  +D H+ +LR++L     G+ +  +RG+GY +K
Sbjct: 180 NYEEEIQSNALDAHISRLRKRLLDASAGVSVHNIRGIGYLLK 221