Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  126 bits (316), Expect = 4e-34
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 14/223 (6%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIA--DVKQH--WDKA-DLVILDRQLPDGDS 59
           LLLVED++ +A  L  +L +  +D +  +T+   D+ +H   D   DLV+LDRQLPDGD 
Sbjct: 3   LLLVEDEREMAAALSAALHR--FDII-VDTVGTLDLARHAIMDSVHDLVVLDRQLPDGDG 59

Query: 60  VQHLMDWKKIKDIP-VILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSP 118
           +Q + D + +   P VI+LTA   + D++ GL+ GA+DYL KPFA  EL ARIRA +R P
Sbjct: 60  IQLIEDLRLLPVTPPVIVLTAQGGLADRINGLNLGADDYLAKPFAVEELLARIRALMRRP 119

Query: 119 DSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHV 178
            +G          L     TREV   GE + LTR E  +L  L    GR   R  L + V
Sbjct: 120 -AGTVKMTARLGALEFCFETREVRIKGEFLPLTRRELLILEALLRRQGRTVLRSMLEEAV 178

Query: 179 WGYNHFPTTRTVDTHVLQLRQKL----PGLEIETLRGVGYKMK 217
           + ++    +  +D+H+ +LR+KL     G+E+  +RGVGY M+
Sbjct: 179 YNFDDEIQSNALDSHISRLRRKLAAADAGVEVHGIRGVGYLMR 221