Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  131 bits (330), Expect = 9e-36
 Identities = 80/221 (36%), Positives = 130/221 (58%), Gaps = 12/221 (5%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGY------DCLHAETIADVKQHWDKADLVILDRQLPDGD 58
           +L+VEDD NL   L  +L++AGY      D      + D + +    D ++LD  LP  D
Sbjct: 3   ILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPY----DAIVLDIGLPQLD 58

Query: 59  SVQHLMDWKKI-KDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRS 117
            +  +  W+   K +PV++LTA     DKV G+DAGA+DY+TKPF   E+ AR+RA +R 
Sbjct: 59  GITVVEKWRAAGKAMPVLILTARDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRR 118

Query: 118 PDSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDH 177
             +G   S++V   + +D  + +   NG ++ LT  EF LL +L  ++G V +R EL++H
Sbjct: 119 A-AGHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSYLMHHMGEVVSRTELVEH 177

Query: 178 VWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA 218
           ++  +    + T++  V +LR+K+    IET+RG+GY+M+A
Sbjct: 178 MYDQDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQA 218