Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 19/198 (9%)

Query: 301 HELRTPIASLSLTVEGFRREF-EHLP-ESLYDEFRRLCEDSRRLRQLAEASKDYLQSDSK 358
           HELRTPIA++ + VE  +    +H+P E  ++ F R+   + R  +L       ++S+++
Sbjct: 266 HELRTPIAAMRVNVEALQSLLTQHIPTERQHELFARVLNSNARAERLVGQLLRLMRSNAQ 325

Query: 359 -----PLASDWVPSVEEWLQYKVEEEFSGNVTLKLNQDIAAKL--NVYWLGTCVDNLLRN 411
                PL  D +  ++E L           V ++L  D   ++  +   L + +DNL+ N
Sbjct: 326 ASAPGPLRLDDL--LQERLAALSALAHVREVEIELVTDEPVEIAGDRDSLVSMIDNLIDN 383

Query: 412 AVKYGVAPVTLEVITQT--NLVTFKVTDQG-----SLTHRDW-RHLRKPFVSKSGLGLGL 463
           A KY     T+ V  +   N     V DQG     +L  R + R  R P  +++G GLGL
Sbjct: 384 ATKYSPVGSTVSVGIRRVGNEAVLTVADQGPGIMPALRERVFDRFFRDPDQTQTGSGLGL 443

Query: 464 TIVESMVGRMGGKMSLEG 481
            IV +++   GG ++L+G
Sbjct: 444 AIVRAVIDAHGGTIALDG 461