Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 24/208 (11%)

Query: 290 RSRMLILQILTHELRTPIASLSLTVEGFRREFEHLPESLYDEFRRLCEDSRRLRQLAEAS 349
           R R LI     HELRTP+A++ + VE  + +     E   +    L   + R  +L    
Sbjct: 246 RERSLIADA-AHELRTPLAAMRVNVEALKEQ--STDEGQRELMGNLLRSNDRAARLVGQL 302

Query: 350 KDYLQSDSKPLASDWVPSVEEWLQYKVEEEFSGNVTLKLNQDIAAKL----NVYWLG--- 402
              ++SD+    SD    V   L   V++  +    L   + I  +L     V  LG   
Sbjct: 303 LQLMRSDA---VSDNALPVMLSLDGLVQDRLAMIEGLASARGIELELVCEDRVPVLGERE 359

Query: 403 ---TCVDNLLRNAVKYGVA--PVTLEVITQTNLVTFKVTDQG-----SLTHRDW-RHLRK 451
              + +DNL+ NA+KY  +   V + V  +       V DQG     +L  R + R  R 
Sbjct: 360 SLVSMIDNLVNNAIKYSPSGSTVVVHVAHEGPHALLTVADQGPGIPAALRERVFDRFFRN 419

Query: 452 PFVSKSGLGLGLTIVESMVGRMGGKMSL 479
           P  ++SG GLGL IV+S++ R GG+++L
Sbjct: 420 PDQTQSGSGLGLAIVKSVIDRHGGEVTL 447