Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 29/273 (10%)

Query: 247 NICWDVEDHSDLLRTSMIILVIANIFL--VLGWSGYRWNSKRQEMRSRMLILQILTHELR 304
           N+  D+  H   LR  M  L +A+     ++    +      + +R R   + +++HELR
Sbjct: 122 NVFVDLHRHRKALRHEMDQLAVAHHKQEELVQQLQHTQRELERAVRMRDDFMSMVSHELR 181

Query: 305 TPIASLSLTVE--------GFRREF--EHLPESLYDEFRRLCEDSRRLRQLAEASK---D 351
           TP+ +L L  +        G    F  E LP  +  + R++    R +  + + ++   D
Sbjct: 182 TPLNTLYLEAQLRQLHLSKGNLANFTPERLPSMIERDQRQIRNMVRLIDDMLDVTRMRRD 241

Query: 352 YLQSDSKPL-ASDWVPSVEEWLQYKVEEEFSGNVTLKLNQDIAAKLNVYWLGTCVDNLLR 410
            L   +KP+  S    +V E L+ + E   S  +TL+   ++    + + +   + NLL 
Sbjct: 242 ALSIQTKPVDLSALSRAVVENLRQQAEAAGSP-ITLQTPAELRGVWDEFRIEQVLTNLLT 300

Query: 411 NAVKYGVA-PVTLEVITQTNLVTFKVTDQG-SLTHRDWRHLRKPFVSK-------SGLGL 461
           NA++YG   PV + V  + +     V DQG  +   D   + + F          +GLGL
Sbjct: 301 NALRYGSGKPVEMTVSLEGDTARVAVRDQGIGIAPEDHARIFEQFERTDDSRRHAAGLGL 360

Query: 462 GLTIVESMVGRMGGKMSLEGPP---TTFILEIP 491
           GL I   +V    G + +E  P   + F++++P
Sbjct: 361 GLYITRKIVSLHAGHIGVESAPGEGSRFVVDLP 393