Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., HAMP domain-containing sensor histidine kinase from Cellulophaga baltica 18

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 59/268 (22%), Positives = 125/268 (46%), Gaps = 40/268 (14%)

Query: 258 LLRTSMIILVIANIF---LVLGWSGYRWNSKRQEMRSRML--ILQILTHELRTPIASLSL 312
           L++T + + +++ +F   +V+ ++   +   RQ+  S +    +  +THE +TPIA+++L
Sbjct: 269 LIKTILPMAILSLLFTLVIVVAYTSAIYQLIRQKQISEIKSDFINNMTHEFKTPIATINL 328

Query: 313 TVEGFR--------REFEHLPESLYDEFRRLCEDSRRLRQLAEASKDYL-----QSDSKP 359
            VE  R         + E     + DE +R+      + ++++  K+ L     + D   
Sbjct: 329 AVEAIRNPKIIDDKEKVERYLTMIKDENKRMHAQVENVLRISKLEKNQLDISKDRVDVHD 388

Query: 360 LASDWVPSVEEWLQYKVEEEFSGNVTLKLNQDIAAKL--NVYWLGTCVDNLLRNAVKYGV 417
           +  D +  VE      + ++  G + L L  + +  L  ++++    V N+L NA+KY  
Sbjct: 389 IIHDAMAHVE-----LIVDDRGGYINLHLEAESSEVLASDMHFTNVIV-NILDNAIKYSP 442

Query: 418 APVTLEVITQ--TNLVTFKVTDQGS---------LTHRDWRHLRKPFVSKSGLGLGLTIV 466
               ++V T+   N +  K+ DQG+         +  + +R       +  G GLGL  V
Sbjct: 443 EAPKIDVYTEVANNNIIIKIKDQGAGMSKAVLKKVFEKFYREHTGNIHNVKGHGLGLAYV 502

Query: 467 ESMVGRMGGKMSLE---GPPTTFILEIP 491
           + ++    G++ +E   G  +TF +++P
Sbjct: 503 KKIIEDHQGEVYVESEKGKGSTFYVKLP 530