Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  196 bits (497), Expect = 1e-54
 Identities = 136/416 (32%), Positives = 224/416 (53%), Gaps = 11/416 (2%)

Query: 4   SFVTSPWFRFGFPLLLLVAIWLGLSNVVLVIKSNLGMAVNLPYILFLIALTVAHIFKQSR 63
           S V++  F    P LLL+   L  + V  +      +   LP ++ L+  +   ++++ R
Sbjct: 2   SRVSAVRFNHFLPSLLLLLAGLSAAYVKELNVFFTSLFNVLPTLVLLLGGSYCAVYRRQR 61

Query: 64  IAMVAMTMLLAYWLIQIRLQT----PLTVNSTMLELIMLSLLLPVACFLPYAYKNAGLFS 119
              + +T+ +AY+L+  +               +   +  LLLP+   +   ++      
Sbjct: 62  ELFLMITVYIAYFLLDTQTDFYRDHGRVREDAAVVFHLCCLLLPLLFSIYALWQEKTHLF 121

Query: 120 KSFLSYLAILLLFIFWAWLTQLHIGETDHSSLTEGIFFVVPQISRLPLVVVAYLVALAGI 179
           + F++  A+LL     A   +    +   + L E I +     S + L+ ++Y + L G 
Sbjct: 122 RDFVARGAVLLAIGSVALALEQSYPQAVLNWLAE-IRWPALHGSWMSLIQLSYPMFLIGF 180

Query: 180 AAISVLTRNQILDVVVYSSIVLSMNAFVL---FHVPYISTIMFTLSGLLILVYLISAGYE 236
             ++     Q   +     + L    ++L   F +P+   IM +   L+I   +    Y+
Sbjct: 181 LTLAAQYWYQPRPLHAAQLVGLLGMFWMLPQTFILPFTLNIMCSQVMLMIAAGVAHEAYQ 240

Query: 237 MAFNDPLTQIPGRQALDQDLKHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRL 296
           MAF D LT +PGR+AL++ ++ +GR + LAM DVDHFK+FNDT+GHD GD VLRLVAS+L
Sbjct: 241 MAFRDELTGLPGRRALNERMQRLGRNYVLAMSDVDHFKRFNDTHGHDVGDQVLRLVASKL 300

Query: 297 REINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEG 356
            ++NG  R YRYGGEEF++++ GK  +E LP +E +R  I  Y++ +R+++ RP+   +G
Sbjct: 301 SKVNGGGRAYRYGGEEFAVVFAGKTVEECLPHLEEIRGIIADYDIKLRNSD-RPQDDHQG 359

Query: 357 AKKRSRKSNSDIVTITISIGVCDSEL-YRHPIEALKAADGALYKAKQAGRNCVKVA 411
            ++RS  S +  V++TISIGV + +   R P E LK+AD ALY AK AGRNCV  A
Sbjct: 360 RQRRS-GSGASSVSVTISIGVAERQAEQRTPEEVLKSADQALYAAKGAGRNCVVAA 414