Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 167 LVVVAYLVALAGIAAISVLTRNQILDVVVYSSIVLSMNAFVLFHVPYISTIMFTLSGLLI 226
           L+  A + AL  ++ +  +  + ++D     S+ +SM +F        S ++ ++S +L+
Sbjct: 162 LLAQAIVAALRFVSVVMGMAGSNLMDGNWIQSLYISMYSF--------SVLLLSISVILM 213

Query: 227 LVYLISAGYE-MAFNDPLTQIPGRQALDQDLKHI----GRKFTLAMLDVDHFKKFNDTYG 281
               +   +E MA  D LT    R+AL    +       R   L M+D+DHFK  ND +G
Sbjct: 214 ATDRVHTEFEYMATRDSLTGALNRRALLDACRGAFASDRRHMALLMVDLDHFKAVNDRFG 273

Query: 282 HDTGDDVLRLVASRLREINGKARVY-RYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYE 340
           H  GD VLR    R++   G A V  RYGGEEF ++  G    E +     L+Q I    
Sbjct: 274 HQMGDKVLREAVRRMQRAVGDAGVLGRYGGEEFVVLLPGTGKVEAMAIAARLKQAI---- 329

Query: 341 LVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKA 400
                          G         +++ +I +SIGV  S+  R   E L  AD ALYKA
Sbjct: 330 ---------------GEPFAPDSPMAEVGSIAVSIGVAASDGGRGVDEVLARADAALYKA 374

Query: 401 KQAGRNCVKVAS 412
           K  GR+ V  A+
Sbjct: 375 KAMGRDQVIAAA 386