Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 27/178 (15%)

Query: 238 AFNDPLTQIPGRQALDQDLKHIG---RKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVAS 294
           A  DPLT I  R+ L   ++ +    R+  +A++D+DHFK+ ND  GHD GD VLR  A+
Sbjct: 123 AHEDPLTGIANRRGLLAQIEELPVEKRQGCIAIIDIDHFKQVNDRLGHDEGDRVLRDFAT 182

Query: 295 RL-REINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSH 353
           RL  +I     V R+GGEEF++ ++  +  E    +  L + I  + L   D + RP   
Sbjct: 183 RLSAQIRRIDMVARWGGEEFAVFFQHCIEDEASWSLARLAEQIREHPL--GDVDGRP--- 237

Query: 354 AEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCVKVA 411
                            IT S G+C  +      E L+ AD ALY+AK  GRN ++ A
Sbjct: 238 -----------------ITFSAGICRWK-GEEMDEVLRLADQALYEAKANGRNQLRRA 277