Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 32/233 (13%)

Query: 184 VLTRNQILDVVVYSSIVLSMNAFVLFHVPYISTIMFTLSGLLILVYLISAGYEMAFNDPL 243
           +L   +++ V+    +V + N F L      + +   ++  L+   L     E    DPL
Sbjct: 393 LLAGGEVIGVLYLRGVVGAENRFRL------TVLTENIASALVNHRLQRGLREQTIRDPL 446

Query: 244 TQIPGRQALDQDLK-------HIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRL 296
           T +  R+ +++ L          G   +L M DVDHFK+FND +GH+ GD VL+ VA+ +
Sbjct: 447 TSLFNRRYMEETLALEIARATRTGSPLSLVMCDVDHFKRFNDEFGHEAGDAVLQAVATEM 506

Query: 297 R-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAE 355
           R        V R+GGEEF+II  G  A  +   +E +RQ I   EL++    +   S   
Sbjct: 507 RSRFRDGDVVCRFGGEEFTIIAPGTSAVVLADRVEIVRQAIS--ELMVNQGGRTLGS--- 561

Query: 356 GAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCV 408
                         T++  +   +  + R     +KAAD ALY+AK+ GRN V
Sbjct: 562 -------------TTMSFGVATWEESMERDGSTLIKAADAALYRAKREGRNRV 601