Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 30/180 (16%)

Query: 238 AFNDPLTQIPGRQALDQDLKHIG---RKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVAS 294
           A  DPLT +  R++L+  L  +    R+F    LD+DHFK+ ND++GHD GD VLR +A 
Sbjct: 389 AQTDPLTGLGNRRSLEISLSLLEAEKREFAAIALDIDHFKRINDSHGHDVGDQVLRQLAE 448

Query: 295 RLREINGKARVY-RYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSH 353
            +R    +  +  R GGEEF I+  G          E LR  ++   +            
Sbjct: 449 LMRRCCREGDLLCRTGGEEFLILLPGATLNVAAAVAERLRVTVQEMPV------------ 496

Query: 354 AEGAKKRSRKSNSDIVTITISIGVC--DSELYRHPIEALKAADGALYKAKQAGRNCVKVA 411
                         +  +TIS+GV   D E +  P+ AL  AD ALY+AKQ GRN V  A
Sbjct: 497 ------------ESVGAVTISLGVTHWDGETHGEPMSALGEADRALYRAKQEGRNRVAFA 544