Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., diguanylate cyclase, zinc-sensing from Escherichia coli BL21

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 66/186 (35%), Positives = 91/186 (48%), Gaps = 32/186 (17%)

Query: 228 VYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGRK-----FTLAMLDVDHFKKFNDTYGH 282
           +YL++    M   D LT +PGR+ LD+   H  R        L +LD+D FK  NDTYGH
Sbjct: 122 IYLLTIRSNM---DVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGH 178

Query: 283 DTGDDVLRLVASRLRE-INGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYEL 341
            TGD VLR +A+ L         VYRYGGEEF II K    +      +A R  +   +L
Sbjct: 179 LTGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDE------DACRAGVRICQL 232

Query: 342 VIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIE-ALKAADGALYKA 400
           V    +    +H+EG            + IT++ GV        P++  +  AD A+Y+ 
Sbjct: 233 V----DNHAITHSEGH-----------INITVTAGV-SRAFPEEPLDVVIGRADRAMYEG 276

Query: 401 KQAGRN 406
           KQ GRN
Sbjct: 277 KQTGRN 282