Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 99/362 (27%), Positives = 160/362 (44%), Gaps = 50/362 (13%)

Query: 73  LAYWLIQIRLQTPLTVNSTMLEL-IMLSLLLPVACFLPYAYK-----NAGLFSKSFLSYL 126
           + Y        TPL +     E+  +LS LL  + F  Y +         L++K+ LS +
Sbjct: 24  IGYLAAAFGFATPLVLGGLPFEVQAILSNLLFFSAFFLYGHALLTHFERPLYTKARLSIV 83

Query: 127 AILLLFI-FWAWLT-----QLHIGETDHSSLTEGIFFVVPQISRLPLVVVAYL-VALAGI 179
           A+ +L + F  ++T     +L IG+   + L   + F V  + + P+ +   L VA+A +
Sbjct: 84  AVAVLLVSFHVFVTPDLKRELVIGDLVCALL---LAFPVWLVRKRPVALADRLMVAIASL 140

Query: 180 AAISVLTRNQILDVVVYSSIVLSMNAFV----LFHVPYISTIMFTLSGLLILVYLISAGY 235
             +  L R  +L V+     ++ ++ F      F++   ++I   L  L +L   IS   
Sbjct: 141 VVLETLVRIGMLLVMTPGGSMIELSEFFESDYAFYMQLAASIFGFLLALSVLASQISVTV 200

Query: 236 EM----AFNDPLTQIPGRQALDQ---DLKHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDV 288
           +     A +DPLT +  R+  D+   D ++      +   D+DHFK+ ND YGH  GD V
Sbjct: 201 DRHLHAAEHDPLTDVLNRRGFDRRVPDFRNDTPDGAIIACDIDHFKRINDVYGHAAGDIV 260

Query: 289 LRLVASRL-REINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTN 347
           L  ++  L R     A V R+GGEEF +   G+ A         +R  + S +       
Sbjct: 261 LIGLSDLLRRNAPDDALVARFGGEEFVVFLPGQTAAAAGQLANGMRTGLSSLDW------ 314

Query: 348 QRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPI-EALKAADGALYKAKQAGRN 406
                       R+R   S    IT S GV       H I +A+K AD +LY AK+ GR+
Sbjct: 315 ------------RNRGVTSQ---ITASFGVSAVARGDHSIHDAIKRADDSLYAAKRGGRD 359

Query: 407 CV 408
            V
Sbjct: 360 QV 361