Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  102 bits (255), Expect = 1e-26
 Identities = 67/177 (37%), Positives = 92/177 (51%), Gaps = 25/177 (14%)

Query: 237 MAFNDPLTQIPGRQALDQDL-----KHIGRKFT-LAMLDVDHFKKFNDTYGHDTGDDVLR 290
           +A  D LT++  R+A D  L       IG ++T L +LD+DHFK+ NDT+GH  GD +L 
Sbjct: 175 IANTDSLTRLSNRRAFDDRLASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILA 234

Query: 291 LVASRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQR 349
            VAS +R  +     V R GGEEF+II  G   +EV+   E +R  +ES           
Sbjct: 235 TVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSLESTPF-------- 286

Query: 350 PKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRN 406
                     R+ +S +D  T+TISIG   +    +P E    AD ALY AK+ GRN
Sbjct: 287 ----------RNSRSGADYGTVTISIGFASAARASNPSELYGHADTALYHAKETGRN 333