Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 28/186 (15%)

Query: 236 EMAFNDPLTQIPGRQALDQDLKHI-------GRKFTLAMLDVDHFKKFNDTYGHDTGDDV 288
           E+A  D LT +  R+ LD  LK +       GR  ++ M D+D FK  NDTYGHD GD+V
Sbjct: 289 ELAIVDGLTGLNNRRYLDSHLKILFDRAAVRGRPISICMTDIDRFKLVNDTYGHDVGDEV 348

Query: 289 LRLVASRLRE-INGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTN 347
           LR  A+R+R  + G     RYGGEEF ++      +      E LR  +E     +R  +
Sbjct: 349 LREFAARIRSTVRGADLACRYGGEEFVVVMPDTPIELAASVAERLRAIVEDKPFYVRSID 408

Query: 348 QRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSE-LYRHPIEALKAADGALYKAKQAGRN 406
           +                    ++IT S+G+  S   +  P E LK AD ALY+AK AGRN
Sbjct: 409 RE-------------------LSITASLGIATSSGAFGAPDEILKQADKALYEAKHAGRN 449

Query: 407 CVKVAS 412
            V  A+
Sbjct: 450 RVVAAA 455