Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 68/289 (23%)

Query: 148 HSSLTEGIFFVVPQI---------SRLPLVVVAYLVALAGIAAISVLTRNQILDVVVYSS 198
           H+S   G F +   +         SR  L  +  L A AG                + +S
Sbjct: 122 HASAATGYFMLAGVLLGSRARASRSRKVLATILILQAFAG---------------AIVAS 166

Query: 199 IVLSMNAFVLFHVPYISTIMFTLSGLL--ILVYLISAG----------YEMAFNDPLTQI 246
           IV+  NA V   +P  S +  ++SG+L    + +ISA           + +A  D LT +
Sbjct: 167 IVIPANAAVPNAIPMTSAL--SISGMLGFTAIIMISAKIIMEDTEIRLHRLAMTDHLTGV 224

Query: 247 PGRQALDQDLKHIGRK-------FTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRLREI 299
             R+ L ++ +HI ++         L + D+DHFKK ND YGH +GD VL    +  + +
Sbjct: 225 LNRRGLLEEFEHIKKRSHGSDRYVALVLFDIDHFKKINDRYGHQSGDAVLVHFCNIAQRV 284

Query: 300 NGKARVY-RYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAK 358
            G+  ++ R GGEEF+++ + +     +   EA+R ++   ++  R              
Sbjct: 285 IGERGLFVRMGGEEFALVAEVESPSSTVTLAEAIRSNLRLSKITAR-------------- 330

Query: 359 KRSRKSNSDIVTITISIGVCDSELYRHPIEALKA-ADGALYKAKQAGRN 406
                  ++ + +T S+G+ ++ +    +  +   AD ALY AK+AGRN
Sbjct: 331 -------NEAIKVTTSVGISEAMIKDADLSVMMTEADRALYAAKKAGRN 372