Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  113 bits (283), Expect = 1e-29
 Identities = 108/452 (23%), Positives = 175/452 (38%), Gaps = 66/452 (14%)

Query: 13  AGFCINLCLGILYAWSVFNKAL-----------------------VTDFGWSAADASSPY 49
           A   I+LC+G+ Y +SVF   L                        T   W  +     Y
Sbjct: 31  AALAIHLCIGMAYGFSVFWLPLSRAVGVTKPVACPADMSFVAGLFATSCDWQISQLGWMY 90

Query: 50  AIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMIASG---FASSVLMLNLTFGVM 106
            +  +       + G   +  GPR   ++       G++ S    +   + ML +  GV+
Sbjct: 91  TLFFVLLGSSAAIWGGWLETAGPRKAGLVSAFCWCGGLVISALGVYLHQIWMLWIGSGVI 150

Query: 107 TGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIYLAPLTSALI------THL 160
            G G+G GY     + +KWF P ++GM  G+   GFG  A+  APL + L+      T +
Sbjct: 151 GGIGLGLGYISPVSTLIKWF-PDRRGMATGMAIMGFGGGAMIGAPLANMLMQYFVTPTSV 209

Query: 161 GIQTSFMILGAGVLAIAVPLACTINNPPAGYVPAEPKLKAGQEAKVVAKVANLSWKAMLK 220
           G+  +F+ + A      V  A     P  G+ P      A   A  +    ++      K
Sbjct: 210 GVWQTFLAMAAIYFVFMVGGALGYRVPREGWAPKGWTPPAAS-ANAMVTHRHVHLDVAWK 268

Query: 221 TPQFYALWLMYALAASVGLMIIGNIT--------------NIASVQANLPNAVYLASILA 266
           TPQF+ LW +  L  S G+ +IG  +              ++   Q +      +A+I A
Sbjct: 269 TPQFWLLWAVLCLNVSAGIGVIGMASPMLQEVFGGKLIGLDLTFSQLDAGQKAQIAAIAA 328

Query: 267 IF-------NSGGRVAAGILSDKIGGVRTLLLAFLLQGG---NMVLFATFDSEFTLIIGT 316
            F       N GGR A    SDK+G   T  + F+L      ++   A   S    +   
Sbjct: 329 GFTGLLSLCNIGGRFAWASFSDKLGRKMTYAVFFVLGFALYASIPSLAHMGSVVLFVAAF 388

Query: 317 AIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVVGY--------S 368
            I    YG   A  P+  A+ +G    G  +G L T+W   G IG  +V Y         
Sbjct: 389 CIILSMYGGGFATIPAYLADIFGTHMVGAIHGRLLTAWATAGIIGPVLVNYLREYQIASG 448

Query: 369 MTHGGGYNLAYTISAAMMAVCILLALITKPIS 400
           +     Y+    I + ++ V ++  L+ KP++
Sbjct: 449 IPQQAAYDQTMYILSGLLVVGLVANLLVKPVA 480