Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

 Score =  102 bits (253), Expect = 3e-26
 Identities = 80/373 (21%), Positives = 154/373 (41%), Gaps = 12/373 (3%)

Query: 29  VFNKALVTDFGWSAADASSPYAIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMI 88
           V ++ +  +FGWS    S+  +I  +  + CL VAG + DR+G R +LI    L  L M 
Sbjct: 33  VVSEPMTIEFGWSRTAISAAVSIMMLCTAACLPVAGRIIDRLGARRVLIPSILLLALSMA 92

Query: 89  ASGFASSVLMLNLTFGVMTGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIY 148
              F  S       +  M    +G            WF   ++G+  G+  +G GL   Y
Sbjct: 93  GLAFVQSYWQFIALYIAMGTIAVGTNSTAYMRVITSWF-DHRRGLAIGIAGSGTGLGFAY 151

Query: 149 LAPLTSALITHLGIQTSFMILGAGVLAIAVPLA-CTINNPPAGYVPAE-PKLKAGQEAKV 206
           +   T AL+ H G +  ++ L   +L   +PL    I+  P    P + P+ +A Q+   
Sbjct: 152 VPVFTQALVEHWGWRAGYLGLALILLLGTLPLVLLAIHEAPEHDAPHDRPEARAVQQGD- 210

Query: 207 VAKVANLSWKAMLKTPQFYALWLMYALAASVGLMIIGNITNIASVQ-ANLPNAVYLASIL 265
                  S +  ++   F+ L  ++ + A V   +I ++  +   +  +   A ++AS+ 
Sbjct: 211 -------SIREAMRKADFWVLGGIFVVLAFVLYGLIPHLVPLLQDRGVSAGQAAWIASLF 263

Query: 266 AIFNSGGRVAAGILSDKIGGVRTLLLAFLLQGGNMVLFATFDSEFTLIIGTAIAAVGYGT 325
                 GR+  G + D+    R  ++ F L    ++L A     +  +    +     G 
Sbjct: 264 GSAAFAGRLLIGFMVDQFDARRIAVIFFSLSALGLLLLALPLPTWAFLPAALLLGGSLGA 323

Query: 326 LLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVVGYSMTHGGGYNLAYTISAAM 385
            + +   +T+ ++GL+++   +  L+ +  +   +G    G+     G Y     I A +
Sbjct: 324 EVDMLAYLTSRYFGLRSFAQIFSTLFAAVMVAMGLGPLAFGFVFDMSGSYTAILAIGAPI 383

Query: 386 MAVCILLALITKP 398
             V   + L+  P
Sbjct: 384 CLVAAGMVLLLSP 396