Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., putative Transporter from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 2e-27
 Identities = 94/403 (23%), Positives = 174/403 (43%), Gaps = 28/403 (6%)

Query: 13  AGFCINLCLGILYAWSVFNKALVTDFGWSAADASSPYAIATIAFSVCLLVAGILQDRMGP 72
           A   + L LG+ + + +F + + TDFGW     +   A+  + + +    AG L DR+G 
Sbjct: 21  AALILALSLGVRHGFGLFLEPMSTDFGWGRGVFAFAIALQNLIWGLAQPFAGALADRLGA 80

Query: 73  RNILILGTTLTGLGMIASGFASSVLMLNLTFGVMTGAGI-GFGYACLSPSAMKWFHPSKK 131
             ++I+G  L  +G+I  G A S   L+L+ G++ G G+ G  ++ +     +     K+
Sbjct: 81  ARVVIIGGILYAVGLILMGLADSPWSLSLSAGLLIGIGLSGTSFSVILGVVGRAVPAEKR 140

Query: 132 GMVNGLIAAGFGLAAIYLAPLTSALITHLGIQTSFMILGAGVLAIAVPLACTINNPPAGY 191
            M  G+ +A        + P T  LI  LG   + ++LG  ++A  VP  C + + P   
Sbjct: 141 SMAMGIASAAGSFGQFAMLPGTQGLIQWLGWSAALLVLGL-LVAFIVPFVCLLRDRPLPS 199

Query: 192 VPAEPKLKAGQEAKVVAKVANLSWKAMLKTPQFYALWLM----YALAASVGLMIIGNITN 247
             AE  L  GQ              A+ +       WL+    +     V  + +  +  
Sbjct: 200 HGAEQTL--GQ--------------ALREACTHSGFWLLALGFFVCGFQVVFIGVHLLAY 243

Query: 248 IASVQANLPNAVYLASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLLQGGNMVLFATFD 307
           +            + +++ +FN  G   AG L  ++   R L   +LL+   +VLF    
Sbjct: 244 LVDQHLAAATGTTVLALVGLFNIVGTFTAGWLGGRMSKPRLLTGLYLLRAVVIVLFLWAP 303

Query: 308 -SEFT-LIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVV 365
            SEF+  + G A+  +   T + +     A  +G++N     G+++    +G  +G  + 
Sbjct: 304 VSEFSAYLFGIAMCLLWLST-VPLTNGTVATVFGVRNLSMLGGIVFLFHQLGAFLGGWLG 362

Query: 366 GYSMTHGGGYNLAYTISAAMMAVCILLALITKPISAEKVAQLQ 408
           G      G Y+L + IS   + + +L A +  P+    V++LQ
Sbjct: 363 GVVYDRTGSYDLVWQIS---ILLSLLAAALNWPVRERPVSRLQ 402