Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  114 bits (284), Expect = 9e-30
 Identities = 110/424 (25%), Positives = 180/424 (42%), Gaps = 67/424 (15%)

Query: 32  KALV-TDFGWSAADASSPYAIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMIAS 90
           KAL  TD  W+  D    Y +  +       + G   +R GPR   ++       G++ S
Sbjct: 80  KALTATDCNWTQFDLGWMYTLFFVLLGCSAAIWGGWLERAGPRKAGLVAMLCWCGGLLIS 139

Query: 91  GFA---SSVLMLNLTFGVMTGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAI 147
                   + M+ L  GV+ G G+G GY     + +KWF P ++GM  GL   GFG  A+
Sbjct: 140 ALGIHQHQLWMMWLGSGVIGGIGLGLGYISPVSTLIKWF-PDRRGMATGLAIMGFGGGAM 198

Query: 148 YLAPLTSALI------THLGIQTSFMILG--------AGVLAIAVPLACTINNPPAGYVP 193
             +PL + L+      T  G+  +F++L          G L   VP A   N  PAG+ P
Sbjct: 199 IGSPLATKLMAMFATPTDPGVWQTFVVLALIYAVFMTCGSLGYRVPAA---NWKPAGWTP 255

Query: 194 AEPKLKAGQEAKVVAKVANLSWKAMLKTPQFYALWLMYALAASVGLMIIGNIT------- 246
            +      Q  ++VA   ++  K   KTPQF+ LWL+  +  S  + IIG          
Sbjct: 256 PDV-----QHNRLVA-TRHVHLKNAHKTPQFWLLWLILCMNVSAAIGIIGAAAPMLQETF 309

Query: 247 ----------NIASVQANLPNAVYLASI-------LAIFNSGGRVAAGILSDKIGGVRTL 289
                       A ++A+       A++       +++FN  GR+     SDK+G  RT 
Sbjct: 310 GGVLIGQPQLGFAEIKADEALTATAAAVGAGFVGLISLFNIFGRIGWATSSDKLGR-RTT 368

Query: 290 LLAFLLQGGNMVLFATFDSE-----FTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYG 344
              F + G  M +  T+ +        L++   IA++ YG   A  P+  A+ +G +  G
Sbjct: 369 YFIFFVLGIMMYVCGTYAANHHQLALFLLVFCVIASM-YGGGFATIPAYLADLFGTQFVG 427

Query: 345 TNYGVLYTSWGIGGAIGAAVVGY--------SMTHGGGYNLAYTISAAMMAVCILLALIT 396
             +G L T+W   G +G  +V Y         + +   Y   +   AA++ V     L+ 
Sbjct: 428 AIHGRLLTAWSTAGILGPVIVNYMHDVRLEAHVPYADIYAPIFMTLAALLGVGFTANLLV 487

Query: 397 KPIS 400
           +P++
Sbjct: 488 RPVA 491