Pairwise Alignments

Query, 554 a.a., ATP-dependent endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ATP-dependent endonuclease from Serratia liquefaciens MT49

 Score =  461 bits (1185), Expect = e-134
 Identities = 244/551 (44%), Positives = 337/551 (61%), Gaps = 10/551 (1%)

Query: 12  MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 71
           M LERIEIAGFRGI RLSL  D+ T L+GEN WGKSSLLDAL+++L  +  LY F   DF
Sbjct: 1   MFLERIEIAGFRGINRLSLMLDDNTLLLGENAWGKSSLLDALTLLLAPEQKLYRFEGHDF 60

Query: 72  HVDYSIADAQTQNLQIILVFAANDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 131
           H      +A+ ++LQ++  F   D+      RYR L PLW   E    +I YR       
Sbjct: 61  HFPPGEEEAKERHLQVVFTFCEKDIGHAHLPRYRHLSPLWVKGEDNLNRIYYRCEGELAD 120

Query: 132 YD-ISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSR---RFEKSLANGNGK-- 185
              + T   FLD +GN++ LHH E+LA  ++ +HPV+RL+D+R   R   S  N      
Sbjct: 121 DGTVCTWRGFLDADGNAMQLHHIEQLAHAIIRIHPVLRLRDARFIRRLRPSTLNDENPAD 180

Query: 186 NARVEKRISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFSFKSQSRKNPRRER--DS 243
           N  + +++    R L+  P  +   E+R  L+AM  L+EHYF+ +      PRR+R    
Sbjct: 181 NKALSQQLDQLTRELVRNPQKLTNAELRQGLAAMQQLLEHYFAEQGSQVSRPRRQRLDQD 240

Query: 244 LLYAASPSEKSLSQIIHETKNKQTKLLLLGLLNAYLQGKGPKELRRCARPILIIEDPEGR 303
               A  S  S+++++ E  ++  +L+LLG+ +  LQ KG  +L   ARP+L++EDPE R
Sbjct: 241 QDQQAWRSLDSINRMVAEPNSRSMRLILLGMFSTLLQAKGSIKLDPHARPLLLVEDPETR 300

Query: 304 LHPTHLARAWSFLDLLPMQKILTTNSSDLLGAVPLHSIRRLVRKSDRTIATSVSQRSLSR 363
           LHP  L+ AW  L+ LP+Q+I TTNSS+L+  VP+  + RLVR+S R     +  R LS 
Sbjct: 301 LHPIMLSVAWGLLNQLPLQRITTTNSSELVSLVPVEHVCRLVRESGRVATYRLGPRGLSP 360

Query: 364 DELRRIGFHIRFHRSGALFARCWLLVEGETEVWLFNELAHQCGYNLAAEGVHIIEFAQSG 423
           ++ RRI FHIRF+R  +LFARCWLLVEGETEVWL +ELA QCGY+  AEGV +IEFAQ G
Sbjct: 361 EDGRRIAFHIRFNRPSSLFARCWLLVEGETEVWLLSELARQCGYHFEAEGVRVIEFAQCG 420

Query: 424 LKSLIKVARAFGIDWHVVTDGDPAGKKYSATVRGLLGH--DQERHRLTELPDRDIEHFLY 481
           LK L+K AR  GI+WH + DGD AGKKY+ TVR +L +  D ER RLT LP  D+EHF++
Sbjct: 421 LKPLLKFARRMGIEWHALVDGDEAGKKYANTVRSMLDNHDDNERDRLTALPAPDMEHFMF 480

Query: 482 SHGFEYFFKELVKIPHDHPIPAKKVVSKVLKKHAKPDLALAIVSHCESNGTECIPVLLRW 541
             GF   +  +  +P +  +P +KV+ K +   +KPDLA+ +       GT+ +P LL+ 
Sbjct: 481 REGFSPVYYRVASVPKNTQMPVRKVILKAVHHSSKPDLAIEVAMQAGQWGTDSVPPLLKK 540

Query: 542 TLKRVITMANG 552
              RV  +A G
Sbjct: 541 MFSRVTWLARG 551