Pairwise Alignments

Query, 554 a.a., ATP-dependent endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., Predicted ATP-dependent endonuclease of the OLD family from Enterobacter asburiae PDN3

 Score =  439 bits (1129), Expect = e-127
 Identities = 240/550 (43%), Positives = 340/550 (61%), Gaps = 10/550 (1%)

Query: 12  MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 71
           M LER+EI GFRGI RLSL  ++   LIGEN WGKSSLLDAL+++L  +  LY F   DF
Sbjct: 1   MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEDDLYHFVRDDF 60

Query: 72  HVDYSIADAQTQNLQIILVFAANDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 131
                    + ++L IIL F  ++    +  R+R L P W   + G  +I YR+     +
Sbjct: 61  WFPPGDVTGREKHLHIILTFRESEPGRHRVRRFRPLSPCWVPCDDGFHRIFYRLEGEMAE 120

Query: 132 YD-ISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSRRFEKSLANGNGKNA-RV 189
            + + T   FLD + N + L + + LA+ L+ L PV+RL+D+R F + + NG   N   V
Sbjct: 121 NEGVLTLRDFLDEKANPIPLDNIDDLARHLIRLTPVLRLRDAR-FMRRIRNGTVPNMPEV 179

Query: 190 E---KRISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFSFK--SQSRKNPRRERDSL 244
           E   + +    R L++ P ++  G+IR  LSAM  L+EHYFS +  S+SR    R R   
Sbjct: 180 EVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSESRHRLMRRRSHD 239

Query: 245 LYAASPSEKSLSQIIHETKNKQTKLLLLGLLNAYLQGKGPKELRRCARPILIIEDPEGRL 304
              +      ++++I     +  +++LLGL +  LQ KG   L R ARP+L++EDPE RL
Sbjct: 240 EQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRL 299

Query: 305 HPTHLARAWSFLDLLPMQKILTTNSSDLLGAVPLHSIRRLVRKSDRTIATSVSQRSLSRD 364
           HP  L+ AW  L+LLP+Q+I TTNS +LL   P+  + RLVR+S R  A  +    L+ +
Sbjct: 300 HPIMLSVAWHLLNLLPLQRITTTNSGELLSLTPVEHVCRLVRESSRVSAFRLGPGGLNAE 359

Query: 365 ELRRIGFHIRFHRSGALFARCWLLVEGETEVWLFNELAHQCGYNLAAEGVHIIEFAQSGL 424
           + RRI FHIRF+R+ +LFARCWLLVEGETE W+ NELA QCG++  AEG+ +IEFAQSGL
Sbjct: 360 DGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGL 419

Query: 425 KSLIKVARAFGIDWHVVTDGDPAGKKYSATVRGLLGH--DQERHRLTELPDRDIEHFLYS 482
           K LIK AR  GI+WHV+ DGD AGKKY++TVR LL +  ++ER  LT LP  D+EHF+Y 
Sbjct: 420 KPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNNEREEERDHLTMLPAMDMEHFMYR 479

Query: 483 HGFEYFFKELVKIPHDHPIPAKKVVSKVLKKHAKPDLALAIVSHCESNGTECIPVLLRWT 542
            GF+  F  +  +P D P+  ++V++K + + +KPDLA+ + +     G E +P LLR  
Sbjct: 480 QGFDDVFHRIAMVPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVEAVPTLLRKM 539

Query: 543 LKRVITMANG 552
             RV+ +A G
Sbjct: 540 FSRVLWLARG 549