Pairwise Alignments

Query, 554 a.a., ATP-dependent endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., ATP-dependent endonuclease from Dickeya dadantii 3937

 Score =  443 bits (1139), Expect = e-129
 Identities = 242/550 (44%), Positives = 334/550 (60%), Gaps = 9/550 (1%)

Query: 12  MHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLLDALSVVLPADGTLYPFTLQDF 71
           M+LER+EI GFRGI RLSLT D+ T LIGEN WGKSSLLDALS++L     LY F LQDF
Sbjct: 1   MYLERVEILGFRGINRLSLTLDDNTVLIGENAWGKSSLLDALSLLLTPSPPLYHFDLQDF 60

Query: 72  HVDYSIADAQTQNLQIILVFAANDLHEPKAGRYRKLKPLWQTDEQGAQKIIYRISASRVK 131
           H       ++ ++LQ+I  F  +      A RYR L P+W   E    +I YR+     +
Sbjct: 61  HFTPGDETSRERHLQVIFTFCESAPGHHLAPRYRSLSPVWIKGEGRLHRIFYRLEGEMDE 120

Query: 132 YD-ISTQYAFLDLEGNSLTLHHSEKLAQELMSLHPVIRLKDSRRFEK----SLANGNGKN 186
              I T  +FLD  G +L L + + LA E++ LHPV+RL+D+R   +    +L      N
Sbjct: 121 SQAIFTWRSFLDANGQALPLDNIDWLAGEVIRLHPVLRLRDARFIRRFRTGTLMPQIDDN 180

Query: 187 ARVEKRISNTWRRLMATPGHVNKGEIRSSLSAMNSLVEHYFSFKSQSRKNPRRERDSLLY 246
            R+ ++     R L   P  +   E+R  L AM  LVEHYFS +     + R  R +   
Sbjct: 181 DRLSRQFETLVRELAQNPNRLTNQELRQGLVAMRQLVEHYFSEQGADPNDRRHHRHARAG 240

Query: 247 --AASPSEKSLSQIIHETKNKQTKLLLLGLLNAYLQGKGPKELRRCARPILIIEDPEGRL 304
              A  S  +++++I    ++  +++LL L +  LQ KG   L   ARP+L+IEDPE RL
Sbjct: 241 NGRAWRSLDNINRMISGPNSRSRRIILLELFSTLLQAKGSAALDPHARPLLLIEDPETRL 300

Query: 305 HPTHLARAWSFLDLLPMQKILTTNSSDLLGAVPLHSIRRLVRKSDRTIATSVSQRSLSRD 364
           HP  L+ AW  L  LP+QKI TTNS +LL  VP+  + RLVR+S +     + ++ ++++
Sbjct: 301 HPIMLSVAWGLLTQLPLQKITTTNSGELLSLVPVEQVCRLVRESAKVATYRIGRQGMTQE 360

Query: 365 ELRRIGFHIRFHRSGALFARCWLLVEGETEVWLFNELAHQCGYNLAAEGVHIIEFAQSGL 424
           + RRI FHIRF+R  +LFARCWLLVEGETEVW+ NELA QCG++  AEGV +IEFAQ GL
Sbjct: 361 DSRRITFHIRFNRPASLFARCWLLVEGETEVWMLNELARQCGHHFEAEGVRVIEFAQVGL 420

Query: 425 KSLIKVARAFGIDWHVVTDGDPAGKKYSATVRGLL--GHDQERHRLTELPDRDIEHFLYS 482
           K L+K A   GI+WHV+ DGD AGKKY+AT R LL   ++ ER  LT LP  D+EHF+Y 
Sbjct: 421 KPLLKFAYRMGIEWHVLVDGDDAGKKYAATARSLLQAQNESERDHLTVLPALDMEHFMYR 480

Query: 483 HGFEYFFKELVKIPHDHPIPAKKVVSKVLKKHAKPDLALAIVSHCESNGTECIPVLLRWT 542
           +GF   +  + ++P   P+ A KV++K + + +KPDLA+ +     S G   IP L+R  
Sbjct: 481 NGFSQVYHRVAQLPEPVPLSAAKVITKAIHRTSKPDLAIEVALEAASLGESAIPPLIRGM 540

Query: 543 LKRVITMANG 552
             RV+ +A G
Sbjct: 541 FSRVLWLARG 550