Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  150 bits (379), Expect = 3e-41
 Identities = 93/270 (34%), Positives = 146/270 (54%), Gaps = 2/270 (0%)

Query: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHWG 63
           S +QL VF  +A  GSV  AA++L LTQ A SM+LA++E+ L  PLF+R+  ++ L   G
Sbjct: 5   SPRQLEVFVQIALAGSVRAAAERLHLTQPAASMALAEMERQLDAPLFDRERGRLHLNARG 64

Query: 64  MWLRPKAKRLLQDAQQI-EMGFYDQHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPEIR 122
             L P A+ LL+   ++   G  +   L+GE+R+GAS T   +LV +L+      +P++ 
Sbjct: 65  RELLPLAQELLERHAELGRRGREEGAALTGELRIGASNTVGNYLVGELLGGFVHAYPQVA 124

Query: 123 ISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRESV 182
           I L V +T+ +   +L++  D+G +EG      +    W  D L + A   HP A+R  +
Sbjct: 125 IRLRVANTETIAAAMLEHTLDVGCVEGPVAHPLLEVRPWRDDRLVVCAPPEHPLARRRGL 184

Query: 183 SLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTCLP 242
             A    A+WVLRE G+ TR   + V+  L P   V  E + +  ++  V  G  + CLP
Sbjct: 185 KPADFAGARWVLREPGSATRATSERVLSQLPPGETV-LELDQIEAIKQAVVAGLGIACLP 243

Query: 243 YLDVERFIESGLLVALNVPELNMERTLSFI 272
            + V   + +G L AL  P L++ R LS +
Sbjct: 244 AVAVTDALATGRLKALKTPFLDLRRKLSLL 273