Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 9e-27
 Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 2/284 (0%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR +L+QL +F+ V D  S S+AA++++LTQ A S+ + QLE+++G+PLF+  GK++ +T
Sbjct: 6   MRMTLRQLQIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMT 65

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
                L+  ++ +    + ++M   D Q  L G+++L A ++ A++ VP L +      P
Sbjct: 66  EAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKL-AIESSAKYFVPHLFAAFKRQHP 124

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKR 179
           E+++ L V +   VI  + D + DL I+     D  +    +  + +  VA   HP + +
Sbjct: 125 EVQLHLTVVNRAQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPHDHPLSLQ 184

Query: 180 ESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLT 239
             + L  LE    +LRE G+GTR   +              E       R  V  G  + 
Sbjct: 185 GPLRLQDLEPYTLLLREPGSGTRLACEEYFKEKRVHFTQTVEVASAEAQRECVCAGLGVA 244

Query: 240 CLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLA 283
            L    V   + +G L  L V EL + R+   +       +P+A
Sbjct: 245 LLTRHAVNMELATGGLKELPVEELPLYRSWCLVQAKAKRLSPVA 288