Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  167 bits (422), Expect = 4e-46
 Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 11/278 (3%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR++L+QL VF AVA   SVS+AA  LAL+QSA S S+ +LE+     LF+R GK+++L 
Sbjct: 1   MRFTLRQLQVFVAVAQQESVSRAAGLLALSQSAASTSITELERQSSCQLFDRAGKRLSLN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGE-----IRLGASQTPAEHLVPDLISIID 115
             G  L P+A  LL  A++IE       LL+G+     + +GA+ T   +L   LI    
Sbjct: 61  ALGHQLLPQAVALLDQAKEIE------DLLNGKSGFGSLAVGATLTIGNYLATLLIGSFM 114

Query: 116 SDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHP 175
              PE ++ L V++T  ++  V  Y+ DLG+IEG C    I  + W  D L +  +  H 
Sbjct: 115 QQHPESQVKLHVQNTAHIVHQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHH 174

Query: 176 FAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANG 235
            AKR   S+ +L    W+LREQG+GTR  FD  +      L++  E EH   ++  V +G
Sbjct: 175 LAKRGVASMDELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESG 234

Query: 236 PYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273
             + C+  L +      G LV +  P+L++ R   FIW
Sbjct: 235 LGIGCISRLALRDAFRRGSLVPVETPDLDLARQFYFIW 272