Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 1e-26
 Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 6/287 (2%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           M Y L+ +  F  +A+ GS  +AA+ L L+Q A S  + +LE+ LG  L ER  ++++LT
Sbjct: 1   MEYELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLT 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
             G    PKA+RLL D +   +   +     +G++ L    T A + +P +I   +  +P
Sbjct: 61  SVGRDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYP 120

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGI--IEGRCDDNRIYQEVWCRDHLTIVASAHHPFA 177
           +IRI L   S    +E VL  + D GI  + G+  D      V  ++H  +     HP A
Sbjct: 121 KIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLV--QEHFVLACRRDHPLA 178

Query: 178 KRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPY 237
            R SV+  +L   + +   + +G R + D  +  L      + E +H+     +V  G  
Sbjct: 179 NRASVTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLG 238

Query: 238 LTCLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAE 284
           ++ +P L +    +   LV++ + E  + RTL  ++R     +P AE
Sbjct: 239 VSAMPSLAMPN-ADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAE 284