Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  169 bits (428), Expect = 7e-47
 Identities = 101/278 (36%), Positives = 152/278 (54%), Gaps = 11/278 (3%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR++L+Q+ VF AVA   SVS+AA  LAL+QSA S S+ +LE+     LF+R GK++AL 
Sbjct: 1   MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGE-----IRLGASQTPAEHLVPDLISIID 115
             G  L P+A  LL  A++IE       LL+G+     + +GA+ T   +L   LI    
Sbjct: 61  ALGHQLLPQAVALLDQAKEIE------DLLNGKSGFGSLAVGATLTIGNYLATLLIGNYM 114

Query: 116 SDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHP 175
              PE ++ L V++T  +++ V  Y+ DLG+IEG C+   +  + W  D L +  +  HP
Sbjct: 115 QTHPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHP 174

Query: 176 FAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANG 235
            AK     +  L Q  W+LREQG+GTR  FD  +     +L++  E EH   ++  V +G
Sbjct: 175 LAKLGRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESG 234

Query: 236 PYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273
             + C+  L +      G LV +  PEL++ R   FIW
Sbjct: 235 LGIGCISRLALRDAFRRGSLVPVETPELDLLRQFYFIW 272