Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  172 bits (435), Expect = 1e-47
 Identities = 103/288 (35%), Positives = 162/288 (56%), Gaps = 7/288 (2%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           M  +L+QL VF  V   GS +QA+  LAL+QSA S +L  LE  LG  LF+R GK++ + 
Sbjct: 1   MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPE 120
             G  L P+A  LL+ A +IE  F + +   G IR+ AS T   +++P +I+    D+P+
Sbjct: 61  EHGRLLYPRALALLEQAVEIEQLFREDN---GAIRIYASSTIGNYILPAVIARYRHDYPQ 117

Query: 121 IRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRE 180
           + I L V +++ V++ VLD++ D+G IEG C    I  E W  D L + A+   P A R 
Sbjct: 118 LPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLA-RG 176

Query: 181 SVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTC 240
            V+L QL  A W+LRE+G+GTR I D ++   +P  ++  E  +   ++  V +G  ++C
Sbjct: 177 PVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISC 236

Query: 241 LPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAECIKR 288
           L    +E  +++G L  + VP   + RTL   WR    +  L+  ++R
Sbjct: 237 LSRRVIEDQLQAGTLSEVAVPLPRLMRTL---WRIHHRQKHLSNALRR 281