Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., LysR substrate-binding domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  111 bits (278), Expect = 2e-29
 Identities = 82/259 (31%), Positives = 131/259 (50%), Gaps = 5/259 (1%)

Query: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHWG 63
           +L QL +F AVA+   V++AA+ L LTQSA S ++  LE   G  LF+R G+ + L   G
Sbjct: 2   TLDQLRIFVAVAERQHVTRAAEALNLTQSAVSSAVTTLEGRHGVALFDRVGRNIVLNEAG 61

Query: 64  MWLRPKAKRLLQDAQQIEMGFYDQH-LLSGEIRLGASQTPAEHLVPDLISIIDSDFPEIR 122
                +AK +L   +  +    D   L  G + + ASQT A   +P  ++      P IR
Sbjct: 62  ATFLVEAKAILARVEAAQDALDDLGGLKRGRLSIHASQTIAGWWLPARLTRFHQAHPGIR 121

Query: 123 ISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRESV 182
           I + + +T+ V + VL+   +LG++EG  ++  + + V   D L +V +A HP A ++  
Sbjct: 122 IEVSIGNTREVADAVLEGCAELGLVEGELNEPALSRSVLDHDELVLVVAADHP-AAQDGA 180

Query: 183 SLAQLEQAKWVLREQGAGTRNIFDSVIHP---LIPDLDVWREYEHVPVLRTLVANGPYLT 239
               L+Q  WVLRE G+GTR+ F++ ++     I  LDV         +   V  G   T
Sbjct: 181 GPPDLKQMTWVLREPGSGTRSAFETALNQRGLAIDALDVAMTLPGNEAVAAAVEAGAGAT 240

Query: 240 CLPYLDVERFIESGLLVAL 258
            +    V   + +G+L AL
Sbjct: 241 VVSRNVVAARLRAGILAAL 259