Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., transcriptional regulator of yefH from Escherichia coli BL21

 Score =  103 bits (258), Expect = 4e-27
 Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 9/303 (2%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           M YSLKQL VF  VA   S S+A +++ L+QSA S S+ +LE   G  L +R  +++ LT
Sbjct: 1   MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60

Query: 61  HWGMWLRPKAKRLLQDAQQI--EMGFYDQHLLSGEIRLGASQTPAEHLVPDLISIIDSDF 118
             G  L  + +RLL +      + G   Q  LSG++R+ ASQT + HL+P  I+     +
Sbjct: 61  DAGQQLALRLERLLDELNSTLRDTGRMGQQ-LSGKVRVAASQTISAHLIPQCIAESHRRY 119

Query: 119 PEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAK 178
           P+I+  L  +  + V+E +     D GI+        +  E    +   ++       A 
Sbjct: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179

Query: 179 RESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYL 238
            + V    L+ AK VL++  +G+R + D+ +       ++ +E  H   L  +VA G  +
Sbjct: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239

Query: 239 TCLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAEC----IKREGLRMM 294
           + LP L +     S L+V    P   +ER L  + R +   +  AE     ++ +G  +M
Sbjct: 240 SILPALALPLPEGSPLVVQRITPV--VERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297

Query: 295 KGK 297
            G+
Sbjct: 298 AGR 300