Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Nitrite transporter NirC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 27/281 (9%)

Query: 19  AEAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVAFS 78
           A A + A   A    G  +  S MAGA++GL  +   T+      +   +  L  G  F 
Sbjct: 11  ANAARIARLSANNPLGFWVS-SAMAGAYVGLGIILIFTLGNLLDPS---VRPLVMGATFG 66

Query: 79  MGLILIVICGGELFTS-SVLSSISWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTAA 137
           + L L++I G ELFT  ++  ++      IS G+M +I  + ++GN +G++F+ LL +  
Sbjct: 67  IALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWG 126

Query: 138 GLYQLDEGQWGLNALNIAQHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTKAAMT 197
           G   L      ++++ +A+     T +  F  G LCN LVCLAIW+   +       A+ 
Sbjct: 127 GGSLLPVDTSIVHSVALAKTTAPATVL--FFKGALCNWLVCLAIWMAIRTEGTAKFLAIW 184

Query: 198 IMPVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFITANL 257
              +A F++SG+EH VANM +  L            W         +SD      I  NL
Sbjct: 185 WCLLA-FIASGYEHSVANMTLFALS-----------W------FGHHSDAYTLAGIGHNL 226

Query: 258 IPVTLGNIVGGAVLVGLANWSIYRRPQLKAANVVTITETQA 298
           + VTLGN + G V +GL  W  Y  P+ +      I + +A
Sbjct: 227 LWVTLGNTLSGVVFMGLGYW--YATPKSERPAPAKINQPEA 265