Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., nitrite transporter NirC from Escherichia coli ECRC62

 Score =  101 bits (252), Expect = 3e-26
 Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 31/284 (10%)

Query: 19  AEAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVAFS 78
           A A + A   A    G  +  S MAGA++GL  +   T+      +   +  L  G  F 
Sbjct: 11  ANAARIARLSANNPLGFWVS-SAMAGAYVGLGIILIFTLGNLLDPS---VRPLVMGATFG 66

Query: 79  MGLILIVICGGELFTS-SVLSSISWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTAA 137
           + L L++I G ELFT  ++  +       IS G+M +I  + ++GN +G++F+ +L +  
Sbjct: 67  IALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWG 126

Query: 138 GLYQLDEGQWGLNALNIAQHKLHHTTVQAFAL---GILCNLLVCLAIWLTFSSANAMTKA 194
           G   L      ++++ +A+     TT  A  L   G LCN LVCLAIW+   +  A    
Sbjct: 127 GGSLLPVDTSIVHSVALAK-----TTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFI 181

Query: 195 AMTIMPVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFIT 254
           A+    +A F++SG+EH +ANM +  L            W         +S+      I 
Sbjct: 182 AIWWCLLA-FIASGYEHSIANMTLFALS-----------W------FGNHSEAYTLAGIG 223

Query: 255 ANLIPVTLGNIVGGAVLVGLANWSIYRRPQLKAANVVTITETQA 298
            NL+ VTLGN + GAV +GL  W    +     A+    TET A
Sbjct: 224 HNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAA 267