Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., formate channel from Escherichia coli BL21

 Score =  285 bits (729), Expect = 1e-81
 Identities = 135/269 (50%), Positives = 186/269 (69%)

Query: 14  PTEMMAEAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAG 73
           P  M   AE+  + KA K       L++ AG FI +AF+FYIT TTG+ +  +G+++L G
Sbjct: 12  PAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVG 71

Query: 74  GVAFSMGLILIVICGGELFTSSVLSSISWANREISFGKMLSIWGKVYVGNFIGAIFLLLL 133
           G+ FS+GLIL V+CG +LFTS+VL  ++ A+  I++G++   W  VY GN +GA+  +LL
Sbjct: 72  GICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLL 131

Query: 134 VTAAGLYQLDEGQWGLNALNIAQHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTK 193
           +  +G Y    GQWGLN L  A HK+HHT ++A  LGIL NL+VCLA+W+++S  + M K
Sbjct: 132 MWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDK 191

Query: 194 AAMTIMPVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFI 253
           A + ++PVAMFV+SGFEH +ANMFM+P+GIVI++FA   FW  VG     +S L V  FI
Sbjct: 192 AFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFI 251

Query: 254 TANLIPVTLGNIVGGAVLVGLANWSIYRR 282
           T NLIPVT+GNI+GG +LVGL  W IY R
Sbjct: 252 TDNLIPVTIGNIIGGGLLVGLTYWVIYLR 280