Pairwise Alignments

Query, 224 a.a., DedA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., DedA family inner membrane protein YqjA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  120 bits (302), Expect = 2e-32
 Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 4/205 (1%)

Query: 1   MDSVLSIFSALWHHDAFALQNVNLL-LLYFCLALLIFLESGFLPAAPLPCDSVIVLSGSL 59
           M+ +  + +ALW  D   L N +++ +LYF L +++FLE+G LPAA LP DS+++L G L
Sbjct: 1   MELLTQLLNALWAQDFETLANPSMIGMLYFVLFMILFLENGLLPAAFLPGDSLLILVGVL 60

Query: 60  AATGVLQLHWVLITLFLAGWLGSLVAFYQGSQLKHWRIINNWLAKVPDKQLMMTDKLMRR 119
            A G +     ++ L +A  LG  V++ QG  L + R + NWL+ +P         L  +
Sbjct: 61  IAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHK 120

Query: 120 YGLIALFFGRFFPVVRSLLPMVMGLRNSVQPLRFLSASAISALCWVLFLVGAGFGISLLP 179
           +GL AL  GRF   VR+LLP + G+ + +   RF   + +S L WVL L   G+ +   P
Sbjct: 121 HGLSALLIGRFIAFVRTLLPTIAGI-SGLNNARFQFFNWMSGLLWVLILTSLGYLLGKTP 179

Query: 180 T--KLEQFATKLLMIAPIFTLILAL 202
              K E      LM+ P+  L   L
Sbjct: 180 VFMKYEDQLMSCLMLLPVVLLFFGL 204