Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., KDP operon transcriptional regulatory protein KdpE from Xanthobacter sp. DMC5

 Score =  187 bits (476), Expect = 1e-52
 Identities = 107/232 (46%), Positives = 152/232 (65%), Gaps = 8/232 (3%)

Query: 1   MNSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPD 60
           +++ +K+L+++DE  I+R L   +    Y V+ A+T  + L L+A   P L++LDLGLPD
Sbjct: 1   VSAAVKLLVVDDEPAIRRLLATGLPTQGYGVESAATGAEALALMAAGAPDLVILDLGLPD 60

Query: 61  QDGISLTRELRAWTQT-PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVAL 119
             G  L R  R   +T PI+++S+R  E   V+AL+AGA+DY+TKPFG  EL+ARIRVAL
Sbjct: 61  IPGRDLLRRWREEGRTCPIIILSSRTDEPGIVEALEAGADDYVTKPFGMNELVARIRVAL 120

Query: 120 RLAPSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQ 179
           R     +  E+  F +GDL +DLV + V      VKL+  EY IL++L ++ GKVLTH  
Sbjct: 121 RHRLQQQG-EKPLFVVGDLSVDLVRRIVKVKDREVKLSPKEYAILRVLVQHAGKVLTHHY 179

Query: 180 ILKEVWGGNYVEHH--HYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVD 229
           +L +VWG    E H   Y+R++V QLR K+EDNP +PR+I TE GVGYRL +
Sbjct: 180 LLSQVWG----EMHDLQYLRVYVRQLRQKLEDNPEKPRYIRTETGVGYRLAE 227