Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., transcriptional regulator PhoB from Pseudomonas simiae WCS417

 Score =  143 bits (360), Expect = 3e-39
 Identities = 81/227 (35%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 7   ILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGISL 66
           ILI++DEAPI+  + V +    Y    A  ++Q   ++ +  P LILLD  LP   GI L
Sbjct: 6   ILIVDDEAPIREMIAVALEMAGYDCLEAENSQQAHAIIVDRKPDLILLDWMLPGTSGIEL 65

Query: 67  TRELRAWTQT---PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP 123
            R L+    T   PI++++A+ +E +K+Q L+ GA+DY+TKPF   EL+AR++  LR A 
Sbjct: 66  ARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRRAG 125

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
            T+   +   E+G L+LD +  +VT  G P ++  TEY +L+    +  +  T  Q+L +
Sbjct: 126 PTDG--EAPIEVGGLLLDPISHRVTIDGTPAEMGPTEYRLLQFFMTHQERAYTRGQLLDQ 183

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVDK 230
           VWGGN       V +H+ +LR  + +  A    + T  G GYR   K
Sbjct: 184 VWGGNVYVEERTVDVHIRRLRKALGE--AYENLVQTVRGTGYRFSTK 228