Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., DNA-binding response regulator KdpE from Variovorax sp. SCN45

 Score =  212 bits (540), Expect = 4e-60
 Identities = 107/227 (47%), Positives = 146/227 (64%), Gaps = 6/227 (2%)

Query: 8   LIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGISLT 67
           ++IEDE  I+RF+   +    + V  A T   GL       P L++LDLGLPD DG+SL 
Sbjct: 7   IVIEDEPQIRRFVRGALEAEGWLVHEAGTLRDGLAAAGTRQPDLLVLDLGLPDGDGVSLI 66

Query: 68  RELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRL------ 121
           R++R W+  PI+V+SAR  EADK+ ALDAGA+DYLTKPFG+ EL+AR+R  LR       
Sbjct: 67  RDVRGWSAVPIIVLSARTDEADKIAALDAGADDYLTKPFGTGELLARVRANLRRPRAAGG 126

Query: 122 APSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQIL 181
               +   +  F  G++  D   + V +AG  V LT TEY +L +L  N G+VLT +Q+L
Sbjct: 127 GGGNDEPAEALFRFGEIEFDRAARLVRRAGAEVHLTPTEYRLLSVLVANAGRVLTQRQLL 186

Query: 182 KEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           +EVWG +Y +  HY+RI++  LR K+E +PAQPR +LTE  VGYRLV
Sbjct: 187 REVWGPSYTDQSHYLRIYMGHLRQKLEADPAQPRHLLTETAVGYRLV 233