Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  152 bits (384), Expect = 5e-42
 Identities = 87/231 (37%), Positives = 136/231 (58%), Gaps = 4/231 (1%)

Query: 1   MNSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPD 60
           M++  ++LI+ED+A I   L + +    Y V+ A+    GL  +   N   ++LDL LP 
Sbjct: 1   MDTAKRVLIVEDDAHIAELLRMHLRDEGYAVEHAADGHAGLRELERGNWDALVLDLMLPG 60

Query: 61  QDGISLTRELRAWTQ-TPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVAL 119
            DG+ + R  RA T+ TPI++ISAR  E  ++  L+ GA+DYL KPF   EL+AR++  L
Sbjct: 61  VDGLEICRRARAMTRYTPIIIISARSSEVHRILGLELGADDYLAKPFSVLELVARVKALL 120

Query: 120 RLAPS---TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLT 176
           R   +      +E     LG+L ++ + ++V   G+ ++LT  E+++L   A+N GKV +
Sbjct: 121 RRTDALARNARMESGSLALGNLDIEPLAREVRVDGKLIELTPREFDLLYFFARNPGKVFS 180

Query: 177 HKQILKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
              +L +VWG  +  + H V  H+ +LR KVE +PAQPR ILT  G GY+L
Sbjct: 181 RLDLLNQVWGYQHDGYEHTVNTHINRLRIKVEADPAQPRRILTVWGRGYKL 231