Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 2e-36
 Identities = 80/224 (35%), Positives = 132/224 (58%), Gaps = 5/224 (2%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           ++IL+IED+    R L   +    + V V  TAE+G          LI+LD  LP +DG+
Sbjct: 1   MRILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGL 60

Query: 65  SLTRELRA-WTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP 123
           +L R+LR    +TP+++++AR+   D+V  L+ GA+DYLTKPF  +EL+AR+R  LR   
Sbjct: 61  TLCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLR--- 117

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
            +E +      L DL LD + ++V + G  + LT  E+ IL++L ++ G+V++  ++ ++
Sbjct: 118 RSEIMRPMVLTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQ 177

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           VW  + +   + + +H+  LR KV+  PA P  I T  G G+RL
Sbjct: 178 VWKDDLIAIDNLIDVHIGNLRRKVDAPPAPP-LIHTVRGRGFRL 220