Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 1e-38
 Identities = 78/228 (34%), Positives = 133/228 (58%), Gaps = 5/228 (2%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           K+L+++D+A ++  L   +S   +QV+  +  EQ   L+   N HL++LDL LP +DG+S
Sbjct: 6   KVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLS 65

Query: 66  LTRELR-AWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRL--- 121
           + R LR +    PI++++A+  E D++  L+ GA+DYL KPF   EL+ARI+  LR    
Sbjct: 66  ICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVI 125

Query: 122 -APSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQI 180
            AP   S E+T  E G+  L+L  +++ +  E + LT  E+ +LK L  N  + L+  ++
Sbjct: 126 EAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKL 185

Query: 181 LKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           +    G  Y      + + +++LR  +E +P++PR+I T  G+GY  V
Sbjct: 186 MNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFV 233