Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., two-component system DNA-binding transcriptional dual response regulator PhoB from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 6e-39
 Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 7/227 (3%)

Query: 7   ILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGISL 66
           ILI++DEAPI+  + V +    Y    A  ++Q   ++ +  P LILLD  LP   GI L
Sbjct: 19  ILIVDDEAPIREMIAVALEMAGYDCLEAENSQQAHAIIVDRKPDLILLDWMLPGTSGIEL 78

Query: 67  TRELRAWTQT---PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP 123
            R L+    T   PI++++A+ +E +K+Q L+ GA+DY+TKPF   EL+AR++  LR   
Sbjct: 79  ARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRRTG 138

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
            ++S  +   E+G L+LD +  +VT  G+P ++  TEY +L+    +  +  T  Q+L +
Sbjct: 139 PSDS--EAPIEVGGLLLDPISHRVTIDGKPAEMGPTEYRLLQFFMTHQERAYTRGQLLDQ 196

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVDK 230
           VWGGN       V +H+ +LR  + +  A    + T  G GYR   K
Sbjct: 197 VWGGNVYVEERTVDVHIRRLRKALGE--AYENLVQTVRGTGYRFSTK 241