Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  139 bits (349), Expect = 6e-38
 Identities = 77/223 (34%), Positives = 126/223 (56%), Gaps = 1/223 (0%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           +ILI+ED+  +       +    ++V V +   +    + +  P L++LDL LP +DG+S
Sbjct: 7   RILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGLS 66

Query: 66  LTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPST 125
           + R +R+  Q PI++++AR  E D+VQ LD GA+DY+ KP     L+ARI+  LR + + 
Sbjct: 67  ICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRRSETV 126

Query: 126 ESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEVW 185
           +S  Q     G L +D  L++     + ++LT  E+++L LLA N G+VLT +QI   + 
Sbjct: 127 DSKRQD-LAFGALRIDNRLREARLGEQLIELTGAEFDLLWLLASNAGRVLTREQIFTALR 185

Query: 186 GGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           G  Y      + I ++++R K+ D+P QPR I T    GY  V
Sbjct: 186 GVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLFV 228