Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA-binding heavy metal response regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  149 bits (376), Expect = 4e-41
 Identities = 80/227 (35%), Positives = 136/227 (59%), Gaps = 2/227 (0%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           +++L+IEDE+ +  ++   +S   Y V VAS   QG +L    +  L++LD+ LP  DG 
Sbjct: 1   MRVLVIEDESKLADYVKRGLSEAGYTVDVASDGIQGRYLALEGDYQLLVLDIMLPGIDGF 60

Query: 65  SLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP- 123
            +   LR    TP+++++AR++  D+VQ L AGA+DYL KPF   EL+AR+   LR  P 
Sbjct: 61  GVLSALREKRNTPVLMLTARDRVEDRVQGLQAGADDYLVKPFAFSELLARVAALLRRGPA 120

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
           +      TR  + DL +DL+ ++  +AG+ + LT  E+++L LLA+  G++L+   I ++
Sbjct: 121 AVAEAANTRMAVCDLEMDLISRKAWRAGQRLDLTAKEFSLLALLARRKGQILSRTTIAEQ 180

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVDK 230
           VW  N+    + V + V +LR K++D P +P+ +    G+GY L ++
Sbjct: 181 VWDMNFDSDTNVVEVAVRRLRSKMDD-PFKPKLLHNVRGMGYVLEER 226