Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., response regulator transcription factor HprR from Pantoea agglomerans CFBP13505 P0401

 Score =  140 bits (353), Expect = 2e-38
 Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 5/226 (2%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           +K+L+IED      ++   +    Y V  A+    GLHL  ++   L++LD+ LP  DG 
Sbjct: 1   MKLLLIEDNQKASAWVRKGLEEAGYIVDYAADGRDGLHLGLSYAYSLVILDIMLPGMDGW 60

Query: 65  SLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPS 124
            + + LR  +Q P++ ++AR+   D+V+ L+ GANDYL KPF   EL+AR+R  LR    
Sbjct: 61  QVLKTLRTASQIPVICLTARDSVDDRVKGLELGANDYLVKPFSFAELLARVRNQLRQQQP 120

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
             SV      +GDLVLD    QV + G  + LT+ E+ +L LLA   G++L    +  E+
Sbjct: 121 HSSV----LRVGDLVLDSARFQVLRDGVTLALTRKEFMLLWLLASRHGEILPRTLLASEI 176

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVDK 230
           WG N+    + V + + +LR KV+D P   + I T  G+GY L +K
Sbjct: 177 WGVNFDSETNIVDVAIRRLRRKVDD-PFPKKLITTVRGMGYCLSEK 221